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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Tony Pena | 24th | Chris Tremie | 13th | 16th |
| First Basemen | Mark McGwire | 5th | Tied for 13th | 16th | |
| Second Basemen | Carlos Quintana | 16th | Tied for 16th | 22nd | |
| Third Basemen | Gary Gaetti | 23rd | Tied for 15th | 24th | |
| Shortstops | Tony Fernandez | 6th | Takuro Ishii | 7th | 6th |
| Left Fielders | Albert Belle | 5th | Tied for 17th | 20th | |
| Center Fielders | Lenny Dykstra | 22nd | Tied for 15th | 23rd | |
| Right Fielders | Rob Ducey | 22nd | J.R. Phillips | 6th | 8th |
| Starting Pitchers | Scott Garrelts | 15th | Tied for 18th | 20th | |
| Relievers | Alejandro Pena | 7th | Larry Thomas | Tied for 5th | 6th |
| Closers | Alejandro Pena | 21st | Larry Thomas | 10th | 14th |
